BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H06SP1|AL426752
(735 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1693 1305 0.0
>3x_Contig1693
Length = 15531
Score = 1305 bits (652), Expect = 0.0
Identities = 669/680 (98%), Gaps = 1/680 (0%)
Strand = Plus / Plus
Query: 57 atccaaggcttgcatcsytatctaggtcagcttcgaatgcmaacttggcaccttacgmtt 116
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 7935 atccaaggcttgcatcgttatctaggtcagcttcgaatgcaaacttggcaccttacgatt 7994
Query: 117 cgcacgmttcgttgcacgataacggttcgggactgtctctttcgaaatcctcttcgagga 176
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7995 cgcacgattcgttgcacgataacggttcgggactgtctctttcgaaatcctcttcgagga 8054
Query: 177 agcaatcgaacgctggaagcyttattccacatcatacccttgaaaacttggtggcaccgg 236
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 8055 agcaatcgaacgctggaagctttattccacatcatacccttgaaaacttggtggcaccgg 8114
Query: 237 cgttagatgaaggtgtgactattgtaaatgatgattctactgacttggagtcggtggaaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8115 cgttagatgaaggtgtgactattgtaaatgatgattctactgacttggagtcggtggaaa 8174
Query: 297 tgatttattcgagaagaccttccactatcggmttggacatggcattgggcaggacaagga 356
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 8175 tgatttattcgagaagaccttccactatcggattggacatggcattgggcaggacaagga 8234
Query: 357 ccaattcatcatcggmtgctgccactttgagtgggaacaactcttctacaacaagactga 416
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8235 ccaattcatcatcggatgctgccactttgagtgggaacaactcttctacaacaagactga 8294
Query: 417 tgaggaccaatagtgcctctcaggggtctggcctggaaaccagacctagggtgttacgtt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8295 tgaggaccaatagtgcctctcaggggtctggcctggaaaccagacctagggtgttacgtt 8354
Query: 477 tttactcttacgccgatatgatatcggatgagaactcttcatatccaagaaggccttcca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8355 tttactcttacgccgatatgatatcggatgagaactcttcatatccaagaaggccttcca 8414
Query: 537 taacacaatcgctttcgtcgaccttgttgagacaacaaggtgctggtacgcctacaggmt 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8415 taacacaatcgctttcgtcgaccttgttgagacaacaaggtgctggtacgcctacaggat 8474
Query: 597 ttgatagccacagagcaggaaactctccttcaaatcagctgggttcaccagatttttcta 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8475 ttgatagccacagagcaggaaactctccttcaaatcagctgggttcaccagatttttcta 8534
Query: 657 atccattcttgaacaaccaggctatagctgctgcggta-stgcaaacggtgggaacagtg 715
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 8535 atccattcttgaacaaccaggctatagctgctgcggtagctgcaaacggtgggaacagtg 8594
Query: 716 gacagggtgttagtcccttg 735
||||||||||||||||||||
Sbjct: 8595 gacagggtgttagtcccttg 8614
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3517
Number of Sequences: 1807
Number of extensions: 3517
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 735
length of database: 10,358,551
effective HSP length: 16
effective length of query: 719
effective length of database: 10,329,639
effective search space: 7427010441
effective search space used: 7427010441
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)